STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgCacyl-CoA dehydrogenase MmgC; Region:COG1960I. (598 aa)    
Predicted Functional Partners:
fadB-2
3-hydroxyacyl-CoA dehydrogenase; Region:COG1024I.
 
 0.984
APG92181.1
enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase; Region:COG1024I.
 
 0.916
etfA
Electron transfer flavoprotein subunit alpha; Region:COG2025C.
 
 0.857
etfA-2
Electron transfer flavoprotein subunit alpha; Region:COG2025C.
 
 0.857
etfB
Electron transfer flavoprotein subunit beta; Region:COG2086C.
 
 
 0.819
etfB-2
Electron transfer flavoprotein subunit beta; Region:COG2086C.
 
 
 0.818
fadA
Acyltransferase; Region:COG0183I; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.815
APG90423.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 
 0.794
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
  
 0.719
fadD
long-chain-fatty-acid--CoA ligase FadD; Region:COG0318IQ.
 
 
 0.709
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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