STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG89928.1ABC transporter permease; Region:COG1175G. (362 aa)    
Predicted Functional Partners:
araQ
L-arabinose transport system permease AraQ; Region:COG0395G.
 
 
 0.971
APG89927.1
Extracellular solute-binding protein; Region:COG1653G.
 
   0.905
ugpE-2
Sn-glycerol-3-phosphate transport system permease protein ugpE; Region:COG0395G.
 
 
 0.877
malG
Maltose transport system permease protein malG; Region:COG0395G.
 
 
 0.876
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.869
malK
ABC transporter, ATP-binding protein,Maltose/maltodextrin import; Region:COG3842E; Belongs to the ABC transporter superfamily.
 
 
 0.869
ugpE
Sn-glycerol-3-phosphate transport system permease UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.867
ugpC-2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Region:COG3842E; Belongs to the ABC transporter superfamily.
 
 
 0.865
aglK
Alpha-glucoside transport ATP-binding protein AglK; Region:COG3842E; Belongs to the ABC transporter superfamily.
 
 
 0.861
ugpC-4
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Region:COG3842E; Belongs to the ABC transporter superfamily.
 
 
 0.854
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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