STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC-3Ribose transport system permease RbsC; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family. (334 aa)    
Predicted Functional Partners:
rbsA-3
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.994
lsrB
Autoinducer 2-binding protein LsrB; Region:COG1879G.
 0.989
rhaP
ABC transporter monosaccharide permease; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.982
APG89964.1
Carbohydrate kinase contains FGGY family domain; Region:COG1070G.
 
  
 0.930
rhaM
L-rhamnose mutarotase RhaM; Involved in the anomeric conversion of L-rhamnose.
 
    0.892
APG89362.1
Periplasmic binding protein/LacI transcriptional regulator; Region:COG1879G.
 
 0.874
rbsB
Ribose transport system substrate-binding protein; Region:COG1879G.
 
 0.854
rbsA-4
Ribose import ATP-binding protein RbsA; Region:COG1129G.
 
 0.853
rbsA
Ribose import ATP-binding protein RbsA; Region:COG1129G.
 
 0.849
araG
L-arabinose transport ATP-binding protein AraG; Region:COG1129G.
 
 0.762
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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