STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motCChemotaxis protein MotC. (446 aa)    
Predicted Functional Partners:
motD
Chemotaxis protein MotD; Region:COG3144N.
 
   
 0.954
motB
Chemotaxis protein motility protein B; Region:COG1360N.
 
   
 0.944
APG90007.1
Lytic transglycosylase-like protein, catalytic; Region:COG0741M.
 
     0.943
ftcR
Flagellar transcriptional regulator FtcR; Region:COG0745TK.
 
   
 0.885
flgL
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 
 0.865
flbT
Flagellum biosynthesis repressor protein FlbT; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
   
 0.848
flaF
Flagellar protein FlaF; Region:COG5442N.
 
     0.837
flaC-3
Flagellin C; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 
 0.826
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
    0.816
flgK
Flagellar hook-associated protein FlgK; Region:COG1256N.
 
     0.815
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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