Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
motDChemotaxis protein MotD; Region:COG3144N. (493 aa)    
Predicted Functional Partners:
fliM
Flagellar motor switch protein FliM; Region:COG1868N.
 
  
 0.986
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.986
APG89995.1
Hypothetical protein; Region:COG3334N.
 
  
 0.983
flgJ
Flagellar protein FlgJ peptidoglycan hydrolase; Region:COG3951N.
 
  
 0.975
motB
Chemotaxis protein motility protein B; Region:COG1360N.
 
  
 0.963
flgK
Flagellar hook-associated protein FlgK; Region:COG1256N.
 
  
 0.963
fliE
Flagellar hook-basal body complex protein FliE; Region:COG1677N.
 
  
 0.962
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.961
motC
Chemotaxis protein MotC.
 
     0.961
flgD
Flagellar hook capping protein FlgD; Region:COG1843N.
  
 
 0.957
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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