STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG90007.1Lytic transglycosylase-like protein, catalytic; Region:COG0741M. (183 aa)    
Predicted Functional Partners:
motC
Chemotaxis protein MotC.
 
     0.943
motB
Chemotaxis protein motility protein B; Region:COG1360N.
 
    0.931
motD
Chemotaxis protein MotD; Region:COG3144N.
 
    0.928
flgL
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.877
fliE
Flagellar hook-basal body complex protein FliE; Region:COG1677N.
 
  
 0.867
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.855
flaC-3
Flagellin C; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.854
flgK
Flagellar hook-associated protein FlgK; Region:COG1256N.
 
    0.845
flgF
Flagellar basal-body rod protein FlgF.
 
 
 0.839
flaF
Flagellar protein FlaF; Region:COG5442N.
 
     0.830
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.