STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG90174.1Signaling protein; Region:COG5001T. (447 aa)    
Predicted Functional Partners:
APG92602.1
Signaling protein; Region:COG3452T.
 
 
0.717
APG90291.1
Signaling protein; Region:COG2202T.
 
 
0.639
APG90173.1
Two-component sensor histidine kinase protein; Region:COG0784T.
 
 
 0.594
APG90331.1
GGDEF/EAL sensory box protein; Region:COG0517T.
 
 
0.580
APG92645.1
Signaling protein; Region:COG5001T.
 
 
0.566
APG92497.1
Response regulator/GGDEF domain transcriptional regulator; Region:COG3275T.
 
0.546
cheR
Chemotaxis protein methyltransferase CheR; Region:COG1352NT.
 
  
 0.528
APG91371.1
Diguanylate cyclase; Region:COG2199T.
 
0.515
APG91211.1
Diguanylate cyclase; Region:COG3706TK.
 
0.481
APG91069.1
Transmembrane GGDEF sensory box protein; Region:COG3706TK.
 
0.480
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.