STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG90206.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
APG90207.1
tRNA (adenine37-N(6))-methyltransferase; Region:COG4123J; Belongs to the methyltransferase superfamily.
       0.800
nhaA
Na(+)/H(+) antiporter NhaA; Region:COG0616O.
 
     0.707
APG92286.1
Transmembrane protein; Region:COG3705E.
 
     0.636
APG90838.1
Hypothetical protein; Region:COG5458S.
  
     0.635
APG91944.1
Transmembrane protein.
  
     0.628
APG89906.1
Hypothetical protein.
  
     0.611
APG91945.1
Transmembrane protein; Region:COG1572O.
  
     0.608
ispB
Octaprenyl-diphosphate synthase IspB; Region:COG0142H; Belongs to the FPP/GGPP synthase family.
       0.594
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.551
APG91888.1
Excinuclease ABC, C subunit-like; Region:COG2827L.
  
  
 0.503
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.