Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hcrNADH oxidoreductase Hcr; Region:COG1018C. (366 aa)    
Predicted Functional Partners:
antA
Anthranilate 1,2-dioxygenase large subunit; Region:COG4638PR.
 
 0.998
APG90059.1
Aromatic-ring hydroxylating dioxygenase, alpha-subunit; Region:COG4638PR.
  
 0.929
APG91822.1
Dimethylglycine dehydrogenase; Region:COG0404E; Belongs to the GcvT family.
  
 
 0.921
betB
Betaine aldehyde dehydrogenase BetB; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
  
 
 0.910
stcD-2
N-methylproline demethylase StcD; Region:COG0446I.
 
 
 0.902
nifU-2
Nitrogen-fixing NifU-like protein; Region:COG0822O.
  
 0.902
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
  
 0.899
soxA
Sarcosine oxidase subunit alpha; Region:COG0404E.
 
  
 0.846
nifS
Cysteine desulfurase NifS; Region:COG1104E.
  
 0.842
APG90474.1
Iron-sulfur protein; Region:COG3217R.
 
    0.808
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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