STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacCD-alanyl-D-alanine carboxypeptidase; Region:COG1686M; Belongs to the peptidase S11 family. (417 aa)    
Predicted Functional Partners:
dacD
D-alanyl-D-alanine carboxypeptidase; Region:COG1686M; Belongs to the peptidase S11 family.
  
  
 
0.925
mrcA
Penicillin binding peptidoglycan synthetase protein; Region:COG5009M.
  
  
 0.922
pbpG-2
Penicillin-binding protein 2D.
  
 
 0.921
pbpG
Penicillin-binding protein 2D; Region:COG0744M.
  
 
 0.917
pbpF
Penicillin-binding protein 1F; Region:COG0744M.
   
 
 0.906
APG90265.1
Hypothetical protein.
       0.568
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.497
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.492
ftsW
Lipid II flippase FtsW; Region:COG0772D; Belongs to the SEDS family.
 
   
 0.491
penA
Penicillin-binding protein 2; Region:COG0768DM.
 
  
 0.435
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.