STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG90306.1Protease; Region:COG2931Q. (345 aa)    
Predicted Functional Partners:
APG91672.1
Calcium-binding hemolysin-like protein.
  
     0.762
APG92319.1
Alkaline phosphatase.
 
     0.725
APG91087.1
Type I secretion system ATPase; Region:COG4618U.
 
 
 0.664
hxuC
Heme/hemopexin utilization protein C; Region:COG4771P.
    
 
 0.644
prsE
Type I secretion system membrane fusion protein PrsE; Region:COG0845MV.
 
  
 0.624
prsE-2
Type I secretion system membrane fusion protein PrsE; Region:COG0845MV.
 
  
 0.589
APG90379.1
Hypothetical protein.
  
   
 0.582
aprD
Alkaline protease secretion ATP-binding protein AprD; Region:COG4618U.
 
 
 0.565
APG92135.1
RTX toxin hemolysin-type protein.
  
     0.521
APG92529.1
Hypothetical protein; Region:COG4961UW.
  
    0.519
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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