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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG90330.1Transmembrane protein; Region:COG3247S. (170 aa)    
Predicted Functional Partners:
APG90102.1
Transmembrane protein; Region:COG1285S.
  
  
 0.817
APG89399.1
N-acetyltransferase GCN5; Region:COG1670JO.
  
     0.501
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
       0.495
APG90331.1
GGDEF/EAL sensory box protein; Region:COG0517T.
       0.489
APG92041.1
L-2,4-diaminobutyrate decarboxylase; Region:COG0076E.
   
  
 0.477
APG90533.1
Acetyltransferase protein; Region:COG0454KR.
  
     0.467
APG91356.1
Hypothetical protein.
  
     0.401
gltB-2
Ferredoxin-dependent glutamate synthase 1; Region:COG0067E.
      
 0.400
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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