Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
catECatechol-2,3-dioxygenase; Region:COG2514Q. (295 aa)    
Predicted Functional Partners:
APG90063.1
Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family.
    
 0.912
APG91488.1
Hypothetical protein; Region:COG1942Q; Belongs to the 4-oxalocrotonate tautomerase family.
    
 0.912
mhqO
Ring-cleaving dioxygenase MhqO; Region:COG0346Q.
 
  
 0.727
APG91990.1
Oxidoreductase protein; Region:COG2141HR.
  
  
 0.679
mhqA
Ring-cleaving dioxygenase MhqA; Region:COG0346Q.
 
  
 0.679
APG90373.1
Hypothetical protein; Region:COG3797S.
       0.532
ptrB
Peptidase S9A family; Region:COG1770E.
       0.508
APG90376.1
Universal stress family protein; Region:COG0589T.
       0.455
xlnD
3-hydroxybenzoate 6-hydroxylase; Region:COG0654HC.
     
 0.429
APG89878.1
Isochorismate pyruvate-lyase; Region:COG1605E.
      
 0.408
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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