STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qseB-2Transcriptional regulatory protein QseB; Region:COG0745TK. (223 aa)    
Predicted Functional Partners:
phoQ
Virulence sensor histidine kinase PhoQ; Region:COG0642T.
 
 0.965
APG89611.1
Sensory transduction histidine kinase; Region:COG2205T.
 
 0.871
ragB
Sensor histidine kinase; Region:COG2205T.
 
 
 0.836
divL
Sensor protein DivL; Region:COG2205T.
 
 
 0.834
pleC-2
Non-motile and phage-resistance protein PleC; Region:COG2202T.
 
 
 0.795
pdhS
Cell-division control histidine kinase PdhS; Region:COG3170NW.
 
 
 0.776
APG91315.1
Blue-light-activated protein; Region:COG0784T.
 
 
 0.774
phoR
Alkaline phosphatase synthesis sensor protein PhoR; Region:COG5002T.
 
 
 0.751
APG92390.1
Signal transduction histidine kinase; Region:COG5385S.
  
 
 0.735
pleC
Non-motile and phage-resistance protein PleC; Region:COG0591E.
 
 
 0.724
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.