Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
APG90406.1Outer-membrane lipoprotein; Region:COG4520M. (148 aa)    
Predicted Functional Partners:
tolA
Outer membrane protein; Region:COG3266D.
  
     0.721
cycH
Cytochrome c-type biogenesis protein CycH; Region:COG4235CO.
 
     0.680
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
       0.640
cycK
Cytochrome c-type biogenesis protein CycK; Region:COG1138CO.
       0.640
ccmH
Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase.
       0.640
APG91921.1
Lipoprotein.
  
     0.639
APG91694.1
Hypothetical protein; Region:COG2982M.
  
     0.592
phoQ
Virulence sensor histidine kinase PhoQ; Region:COG0642T.
 
   
 0.566
APG90484.1
Hypothetical protein.
 
     0.548
APG90526.1
Survival protein SurA, peptidyl-prolyl cis-trans isomerase protein; Region:COG0760O.
  
     0.544
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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