Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
APG90469.1Hypothetical protein; Region:COG1376M. (203 aa)    
Predicted Functional Partners:
APG91774.1
ErfK/YbiS/YhnG family protein; Region:COG1376M.
  
     0.570
APG91320.1
GTP-binding protein; Region:COG3768S.
  
     0.547
APG90283.1
Lipoprotein; Region:COG3034M.
 
  
 0.528
APG90276.1
Invasion associated locus B; Region:COG5342R.
  
     0.505
APG91319.1
Amino acid regulated cytosolic protein; Region:COG3106R.
  
     0.489
mepA
Penicillin-insensitive murein endopeptidase MepA; Region:COG3770M.
  
     0.469
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.465
APG92316.1
L,D-transpeptidase YafK; Region:COG3034M.
 
  
 0.447
APG89369.1
Transmembrane protein.
  
     0.432
APG89729.1
Permeases of the major facilitator superfamily.
  
     0.430
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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