STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG90547.1Short chain dehydrogenase; Region:COG1028IQR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (250 aa)    
Predicted Functional Partners:
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.800
fabG-2
3-oxoacyl-ACP reductase; Region:COG1028IQR.
  
     0.667
APG91077.1
Oxidoreductase; Region:COG1028IQR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.662
rkpH
Short-chain dehydrogenase/reductase RkpH; Region:COG1028IQR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.636
APG90544.1
Molybdopterin converting factor subunit; Region:COG1977H.
 
   
 0.565
APG90619.1
Short-chain dehydrogenase; Region:COG1028IQR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.561
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
  
 
 0.552
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Region:COG0558I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.545
phbB
acetoacetyl-CoA reductase PhbB; Region:COG1028IQR.
  
     0.526
moaE
Molybdopterin synthase catalytic subunit MoaE; Region:COG0314H.
  
  
 0.511
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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