STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG90551.1Signal peptide protein. (147 aa)    
Predicted Functional Partners:
APG90550.1
Ribonuclease T2 family protein; Belongs to the RNase T2 family.
       0.795
gst-8
Glutathione S-transferase-like protein; Region:COG0625O.
       0.768
APG89848.1
Succinoglycan biosynthesis protein; Region:COG1525L.
  
     0.739
rlmJ
Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.729
APG90237.1
Glycoside hydrolase family protein; Region:COG3757M.
  
     0.707
APG92544.1
Hypothetical protein.
  
     0.688
APG90022.1
Glycosyl transferase family protein; Region:COG0463M.
  
     0.676
APG91590.1
NTP pyrophosphohydrolase protein, MuT/nudix family; Region:COG0494V.
  
     0.673
thiE
Thiamine-phosphate pyrophosphorylase ThiE; Region:COG0352H.
  
     0.630
APG92405.1
Heat resistant agglutinin 1 signal peptide protein; Region:COG3637M.
  
    0.616
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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