Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fixJ | fixK | SAMCFNEI73_Ch1333 | SAMCFNEI73_Ch1335 | Transcriptional regulatory protein FixJ; Region:COG4566TK. | Nitrogen fixation regulation protein FixK; Region:COG0664T. | 0.454 |
fixJ | fixL | SAMCFNEI73_Ch1333 | SAMCFNEI73_Ch1332 | Transcriptional regulatory protein FixJ; Region:COG4566TK. | Sensor protein FixL; Region:COG3829KT. | 0.996 |
fixJ | fixT | SAMCFNEI73_Ch1333 | SAMCFNEI73_Ch1334 | Transcriptional regulatory protein FixJ; Region:COG4566TK. | Transcriptional regulator protein FixT. | 0.476 |
fixK | fixJ | SAMCFNEI73_Ch1335 | SAMCFNEI73_Ch1333 | Nitrogen fixation regulation protein FixK; Region:COG0664T. | Transcriptional regulatory protein FixJ; Region:COG4566TK. | 0.454 |
fixK | fixL | SAMCFNEI73_Ch1335 | SAMCFNEI73_Ch1332 | Nitrogen fixation regulation protein FixK; Region:COG0664T. | Sensor protein FixL; Region:COG3829KT. | 0.603 |
fixK | fixT | SAMCFNEI73_Ch1335 | SAMCFNEI73_Ch1334 | Nitrogen fixation regulation protein FixK; Region:COG0664T. | Transcriptional regulator protein FixT. | 0.491 |
fixL | fixJ | SAMCFNEI73_Ch1332 | SAMCFNEI73_Ch1333 | Sensor protein FixL; Region:COG3829KT. | Transcriptional regulatory protein FixJ; Region:COG4566TK. | 0.996 |
fixL | fixK | SAMCFNEI73_Ch1332 | SAMCFNEI73_Ch1335 | Sensor protein FixL; Region:COG3829KT. | Nitrogen fixation regulation protein FixK; Region:COG0664T. | 0.603 |
fixL | fixT | SAMCFNEI73_Ch1332 | SAMCFNEI73_Ch1334 | Sensor protein FixL; Region:COG3829KT. | Transcriptional regulator protein FixT. | 0.465 |
fixT | fixJ | SAMCFNEI73_Ch1334 | SAMCFNEI73_Ch1333 | Transcriptional regulator protein FixT. | Transcriptional regulatory protein FixJ; Region:COG4566TK. | 0.476 |
fixT | fixK | SAMCFNEI73_Ch1334 | SAMCFNEI73_Ch1335 | Transcriptional regulator protein FixT. | Nitrogen fixation regulation protein FixK; Region:COG0664T. | 0.491 |
fixT | fixL | SAMCFNEI73_Ch1334 | SAMCFNEI73_Ch1332 | Transcriptional regulator protein FixT. | Sensor protein FixL; Region:COG3829KT. | 0.465 |