Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
APG90948.1Hypothetical protein; Region:COG3827D. (274 aa)    
Predicted Functional Partners:
parB-2
Chromosome-partitioning protein ParB; Region:COG1475D; Belongs to the ParB family.
    
 
 0.769
APG91332.1
Kinesin-like protein; Region:COG1196D.
  
     0.688
APG92399.1
Transmembrane protein.
  
     0.682
APG92302.1
Hypothetical protein.
  
     0.660
APG91694.1
Hypothetical protein; Region:COG2982M.
  
     0.647
APG90860.1
Hypothetical protein; Region:COG5330S.
  
     0.630
APG90443.1
Outer membrane protein y4fJ precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.627
APG90958.1
Soluble lytic murein transglycosylase.
  
     0.604
APG92295.1
Hypothetical protein; Region:COG4093S.
  
     0.597
APG91208.1
Transmembrane protein; Region:COG3164S.
  
     0.567
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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