STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbCPoly-beta-hydroxybutyrate polymerase PhbC; Region:COG3243I. (614 aa)    
Predicted Functional Partners:
APG89368.1
Polyhydroxyalkanoate depolymerase; Region:COG4553I.
 
  
 0.972
phbB
acetoacetyl-CoA reductase PhbB; Region:COG1028IQR.
  
 
 0.953
fadB-2
3-hydroxyacyl-CoA dehydrogenase; Region:COG1024I.
   
 
 0.917
pta
Phosphate acetyltransferase; Region:COG0280C.
  
 0.847
phaR
Polyhydroxyalkanoate synthesis regulator PhaR; Region:COG5394QT.
 
   
 0.800
sfsA
Sugar fermentation stimulation protein; Region:COG1489GT; Belongs to the SfsA family.
       0.772
map
Methionine aminopeptidase Map; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.771
radC
DNA repair protein RadC; Region:COG2003L; Belongs to the UPF0758 family.
       0.751
APG91584.1
3-hydroxyalkanoate synthetase; Region:COG3243I.
 
     0.732
ackA
Acetate kinase AckA; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 0.678
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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