STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbDsb family thioredoxin protein Dsb; Region:COG2761O. (221 aa)    
Predicted Functional Partners:
APG89633.1
Arsenate reductase; Region:COG1393P; Belongs to the ArsC family.
   
 
 0.901
APG91041.1
Peptide ABC transporter substrate-binding protein; Region:COG4166E.
       0.489
APG92060.1
Globin family protein; Region:COG2346P.
  
  
 0.481
APG92358.1
Hemoglobin; Region:COG2346P.
  
  
 0.481
dhe
(S)-2-haloacid dehalogenase 4A; Region:COG1011H.
 
    0.435
flgC
Flagellar basal-body rod protein FlgC; Region:COG1558N; Belongs to the flagella basal body rod proteins family.
    
   0.408
flgD
Flagellar hook capping protein FlgD; Region:COG1843N.
    
   0.408
APG92270.1
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation.
  
  
 0.406
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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