Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG91088.1T1SS secreted agglutinin RTX. (1368 aa)    
Predicted Functional Partners:
APG90463.1
Transposase; Region:COG3039X.
  
     0.704
ftsK-2
DNA translocase FtsK; Region:COG1674D.
   
 
 0.686
APG91381.1
OmpA family protein.
   
 
 0.646
APG89343.1
Phosphotransferase; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
 
    
 0.620
prsE
Type I secretion system membrane fusion protein PrsE; Region:COG0845MV.
 
  
 0.620
APG91087.1
Type I secretion system ATPase; Region:COG4618U.
     
 0.539
APG89858.1
Peptidoglycan-binding protein.
  
 
 0.533
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
  
 
 0.476
APG91085.1
FAD dependent oxidoreductase; Region:COG2072P.
       0.468
APG92338.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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