STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APG91139.1Bacteriophage protein. (609 aa)    
Predicted Functional Partners:
APG91143.1
Hypothetical protein; Region:COG3566S.
 
     0.799
APG91145.1
Hypothetical protein; Region:COG4834S.
 
     0.797
APG91109.1
Hypothetical protein.
 
     0.760
APG91130.1
Primosomal protein I.
 
     0.757
APG91161.1
Hypothetical protein.
 
     0.755
APG91592.1
Hypothetical protein.
 
     0.738
rkpI
Capsular polysaccharide biosynthesis protein RkpI; Region:COG1368M.
  
     0.735
APG92643.1
Hypothetical protein; Region:COG0457R.
  
     0.721
APG91568.1
Hypothetical protein; Region:COG0593L.
  
     0.705
APG90958.1
Soluble lytic murein transglycosylase.
  
     0.692
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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