STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91184.1Fe(3+)-citrate import system permease protein YfmD; Region:COG0609P; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (336 aa)    
Predicted Functional Partners:
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC; Region:COG1120PH.
 
 0.999
APG91182.1
Periplasmic binding protein; Region:COG4594P.
 
 
 0.995
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.972
hmuT
Hemin-binding periplasmic protein HmuT; Region:COG4558P.
 
 
 0.964
APG91818.1
Iron ABC transport system, solute-binding protein; Region:COG0614P.
 
 
 0.952
APG91183.1
Efflux protein.
  
    0.779
hmuS
Hemin transport protein HmuS; Region:COG3720P.
 
  
 0.622
APG91185.1
ABC transporter permease protein YvrB; Region:COG0609P; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    
0.547
hxuC
Heme/hemopexin utilization protein C; Region:COG4771P.
 
  
 0.476
gcvA-3
Glycine cleavage system transcriptional activator; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
       0.443
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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