STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufCATP-dependent transporter SufC; Region:COG0396O. (251 aa)    
Predicted Functional Partners:
sufB
Cysteine desulfurase activator complex subunit SufB; Region:COG0719O.
 
 0.999
sufD
ABC transporter involved in Fe-S cluster assembly; Region:COG0719O.
 
 
 0.999
csd
Cysteine desulfurase Csd; Region:COG0520E; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.996
nifU-2
Nitrogen-fixing NifU-like protein; Region:COG0822O.
 
  
 0.946
APG91218.1
FeS assembly protein; Region:COG2151O.
 
  
 0.916
APG91219.1
HesB nitrogen fixation family protein; Region:COG0316O; Belongs to the HesB/IscA family.
  
 
 0.816
sufE
Cysteine desulfuration protein SufE; Region:COG2166O.
 
 
 0.801
APG90631.1
Aromatic ring hydroxylating enzyme; Region:COG2151O.
 
  
 0.767
nifS
Cysteine desulfurase NifS; Region:COG1104E.
  
  
 0.577
mrp
ATP-binding Mrp family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.557
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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