STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBNADPH dependent thioredoxin reductase TrxB; Region:COG0492O. (324 aa)    
Predicted Functional Partners:
trxA
Thioredoxin; Region:COG3118O; Belongs to the thioredoxin family.
 
 0.995
csd
Cysteine desulfurase Csd; Region:COG0520E; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.924
mdeA
Methionine gamma-lyase MdeA; Region:COG0626E.
   
 
 0.907
APG92811.1
Thioredoxin; Region:COG3118O.
  
 
 0.831
futA
Iron uptake protein A1; Region:COG1840P.
   
    0.663
moeZ
Adenylyltransferase/sulfurtransferase MoeZ; Region:COG0476H.
  
  
 0.652
tlpA
Thiol:disulfide interchange protein TlpA; Region:COG0526O.
  
 
 0.609
cycY
Thiol:disulfide interchange protein CycY; Region:COG0526O.
  
 
 0.603
APG91238.1
HTH-type transcriptional regulator YafC; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
     
 0.590
APG91240.1
Hypothetical protein.
       0.571
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.