Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trxBNADPH dependent thioredoxin reductase TrxB; Region:COG0492O. (324 aa)    
Predicted Functional Partners:
trxA
Thioredoxin; Region:COG3118O; Belongs to the thioredoxin family.
 
 0.992
csd
Cysteine desulfurase Csd; Region:COG0520E; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
  0.922
mdeA
Methionine gamma-lyase MdeA; Region:COG0626E.
   
 
 0.905
APG92811.1
Thioredoxin; Region:COG3118O.
  
 
 0.861
tlpA
Thiol:disulfide interchange protein TlpA; Region:COG0526O.
  
 
 0.721
cycY
Thiol:disulfide interchange protein CycY; Region:COG0526O.
  
 
 0.706
APG91238.1
HTH-type transcriptional regulator YafC; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
     
 0.676
moeZ
Adenylyltransferase/sulfurtransferase MoeZ; Region:COG0476H.
  
    0.633
APG91240.1
Hypothetical protein.
       0.571
gor
Glutathione reductase Gor; Maintains high levels of reduced glutathione.
  
 
 0.542
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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