Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rbsC-4Ribose transport system permease RbsC; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family. (315 aa)    
Predicted Functional Partners:
rbsA-4
Ribose import ATP-binding protein RbsA; Region:COG1129G.
 0.991
rbsB
Ribose transport system substrate-binding protein; Region:COG1879G.
 0.990
APG89362.1
Periplasmic binding protein/LacI transcriptional regulator; Region:COG1879G.
 0.980
rbsA
Ribose import ATP-binding protein RbsA; Region:COG1129G.
 0.978
rbsC
Ribose transport system permease RbsC; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.918
APG91404.1
Inner membrane transport permease YadH; Region:COG0842V.
     
  0.900
rbsA-3
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.896
araG
L-arabinose transport ATP-binding protein AraG; Region:COG1129G.
 
 0.890
rbsA-5
Ribose import ATP-binding protein RbsA; Region:COG1129G.
 
 0.729
APG89810.1
Periplasmic binding protein/LacI transcriptionalregulator; Region:COG1879G.
 
 
 0.726
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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