STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuAHigh-affinity zinc uptake system protein ZnuA; Region:COG4531P. (340 aa)    
Predicted Functional Partners:
znuC
Zinc import ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 
 0.998
znuB
High-affinity zinc uptake system membrane protein ZnuB; Region:COG1108P.
 
 
 0.993
APG92724.1
Iron transport protein, ATP-binding component; Region:COG1121P.
 
  
 0.839
fur-3
Zinc uptake transcriptional regulator protein; Region:COG0735P; Belongs to the Fur family.
 
  
 0.821
APG92726.1
Iron transport system membrane protein; Region:COG1108P.
 
  
 0.723
APG92725.1
Chelated iron transport system membrane protein YfeC; Region:COG1108P.
 
  
 0.661
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.567
APG92723.1
Periplasmic chelated iron-binding protein YfeA; Region:COG0803P; Belongs to the bacterial solute-binding protein 9 family.
 
   
 0.483
APG91205.1
Metalloprotease YebA; Region:COG0739M.
  
  
 0.421
APG92243.1
Metalloendopeptidase; Region:COG0739M.
  
  
 0.421
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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