STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
dctMTRAP dicarboxylate transporter subunit DctM; Region:COG4664Q. (482 aa)    
Predicted Functional Partners:
dctQ
Tripartite ATP-independent periplasmictransporter, DctQ component; Region:COG4665Q.
 
 
 0.996
APG91603.1
TRAP C4-dicarboxylate transport system permeaseDctM subunit; Region:COG4664Q.
  
  
 
0.926
dctP
TRAP dicarboxylate transporter-DctP subunit DctP; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.909
APG91604.1
Transporter dctQ-like transmembrane protein; Region:COG4665Q.
 
  
 0.808
APG91605.1
TRAP dicarboxylate transporter-DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.805
APG91436.1
Hypothetical protein.
       0.548
xynB
Beta-xylosidase XynB; Region:COG3507G; Belongs to the glycosyl hydrolase 43 family.
       0.527
APG92458.1
Hypothetical protein; Region:COG3181C.
  
     0.415
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.