STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APG91438.1Oxidoreductase protein; Region:COG0673R. (377 aa)    
Predicted Functional Partners:
APG91439.1
Sugar phosphate isomerase/epimerase; Region:COG1082G.
 
  
 0.967
APG91443.1
ABC transporter permease; Region:COG1175G.
 
     0.747
APG91444.1
Sugar-binding periplasmic protein; Region:COG1653G.
 
     0.747
APG91442.1
ABC transporter permease; Region:COG0395G.
 
     0.735
APG91440.1
Beta-mannosidase; Region:COG3250G.
 
     0.733
lysS
lysine--tRNA ligase LysS; Region:COG1190J; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.568
APG91437.1
Oxidoreductase protein; Region:COG0667R.
  
    0.550
ugpC-2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Region:COG3842E; Belongs to the ABC transporter superfamily.
 
     0.505
APG91180.1
ABC transporter substrate-binding protein YesO; Region:COG1653G.
 
     0.486
APG91176.1
Hypothetical protein; Region:COG1082G.
 
  
 0.469
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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