Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fixINitrogen fixation protein FixI; Region:COG2217P. (756 aa)    
Predicted Functional Partners:
fixG
Nitrogen fixation protein FixG; Region:COG0348C.
 
  
 0.958
fixS
Nitrogen fixation protein FixS2; Region:COG3197P.
 
  
 0.957
fixH
Nitrogen fixation protein FixH; Region:COG5456P.
 
  
 0.944
fixP
Cbb3-type cytochrome c oxidase subunit FixP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.840
fixO
Cytochrome-c oxidase FixO2; Region:COG2993C.
 
   
 0.827
fixN
Cytochrome c oxidase subunit 1; Region:COG3278C; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.813
fixQ
Cbb3-type cytochrome oxidase.
 
   
 0.574
nirK
Copper-containing nitrite reductase NirK; Region:COG2132DPM; Belongs to the multicopper oxidase family.
 
  
 0.568
ribB
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.565
APG91449.1
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
    0.562
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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