STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixQCbb3-type cytochrome oxidase. (76 aa)    
Predicted Functional Partners:
fixO
Cytochrome-c oxidase FixO2; Region:COG2993C.
 
  
 0.994
fixN
Cytochrome c oxidase subunit 1; Region:COG3278C; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.993
fixP
Cbb3-type cytochrome c oxidase subunit FixP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.983
fixG
Nitrogen fixation protein FixG; Region:COG0348C.
 
  
 0.979
fixH
Nitrogen fixation protein FixH; Region:COG5456P.
 
  
 0.914
APG90629.1
Hypothetical protein.
  
  
 0.803
APG91558.1
Hypothetical protein.
  
  
 0.803
fixS
Nitrogen fixation protein FixS2; Region:COG3197P.
 
  
 0.657
napA
Periplasmic nitrate reductase NapA; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
   
    0.587
fixI
Nitrogen fixation protein FixI; Region:COG2217P.
 
   
 0.574
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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