Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APG91503.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
APG90586.1
Transmembrane protein.
  
     0.731
APG89872.1
Hypothetical protein.
  
     0.601
APG91365.1
Hypothetical protein; Region:COG3184S.
  
     0.561
APG90229.1
Hypothetical protein.
  
     0.544
APG89548.1
MarR family transcriptional regulator; Region:COG1846K.
  
     0.494
APG90097.1
Lipoprotein, VirB7-like.
  
     0.492
APG90300.1
Substrate-specific component BioY of biotin ECF transporter; Region:COG3543S.
  
     0.490
APG92441.1
Hypothetical protein.
  
     0.463
APG90397.1
Hypothetical protein; Region:COG5436S.
  
     0.438
APG91921.1
Lipoprotein.
  
     0.438
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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