STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91513.1Hypothetical protein; Region:COG3832S. (157 aa)    
Predicted Functional Partners:
APG91514.1
ArsR family transcriptional regulator; Region:COG0640K.
 
    0.756
APG91795.1
Cold-shock domain family protein.
  
     0.595
APG89710.1
Glyoxalase family protein; Region:COG2764R.
 
     0.507
cya-17
Adenylate cyclase; Region:COG1672R.
  
     0.500
APG89851.1
Activator of Hsp90 ATPase 1 family protein; Region:COG3832S.
  
     0.495
dgdR-2
HTH-type transcriptional regulator DgdR; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
       0.489
APG89707.1
RNA polymerase sigma-70 factor, ECF subfamily; Region:COG3795S.
 
     0.472
APG91649.1
Hypothetical protein.
  
     0.450
APG89708.1
RNA polymerase sigma-70 factor; Region:COG4941K; Belongs to the sigma-70 factor family.
 
     0.425
APG91568.1
Hypothetical protein; Region:COG0593L.
  
     0.420
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.