Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
APG91558.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
fixO
Cytochrome-c oxidase FixO2; Region:COG2993C.
  
 
 0.944
fixP
Cbb3-type cytochrome c oxidase subunit FixP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.918
fixQ
Cbb3-type cytochrome oxidase.
  
  
 0.803
fbcB
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.752
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit PetA; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.750
fixH
Nitrogen fixation protein FixH; Region:COG5456P.
  
 
 0.703
fbcH
Cytochrome b/c1; Region:COG2857C.
   
 
 0.684
APG91426.1
Hypothetical protein.
  
 
 0.593
cycM
Cytochrome c.
  
 
 0.572
APG92158.1
Cytochrome c2; Region:COG3474C.
  
 
 0.572
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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