STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91569.1C: repressor protein C; Region:COG2932X. (229 aa)    
Predicted Functional Partners:
APG91568.1
Hypothetical protein; Region:COG0593L.
 
     0.793
APG91130.1
Primosomal protein I.
 
     0.699
APG92807.1
Hypothetical protein; Region:COG4544S.
 
     0.682
APG91161.1
Hypothetical protein.
  
  
 0.676
APG91109.1
Hypothetical protein.
 
     0.631
APG90351.1
Hypothetical protein; Region:COG5350R.
  
     0.614
APG91576.1
Hypothetical protein; Region:COG4424M.
  
     0.610
APG90551.1
Signal peptide protein.
  
    0.582
APG90051.1
AsmA protein family; Region:COG2982M.
  
     0.569
APG90237.1
Glycoside hydrolase family protein; Region:COG3757M.
  
     0.569
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.