STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91635.1Transglutaminase; Region:COG3672O. (188 aa)    
Predicted Functional Partners:
fliJ
Flagellar protein FliJ.
  
     0.752
APG90913.1
Zinc-finger domain protein; Region:COG4391S.
  
     0.750
APG90856.1
Hypothetical protein.
  
     0.689
APG90276.1
Invasion associated locus B; Region:COG5342R.
  
     0.669
APG90291.1
Signaling protein; Region:COG2202T.
 
 
 
 0.616
APG92476.1
Integral membrane protein; Region:COG5480S.
  
     0.614
APG90844.1
Hypothetical protein; Region:COG5388S.
 
     0.587
APG90392.1
Hypothetical protein; Region:COG5447S.
  
     0.571
APG89369.1
Transmembrane protein.
  
     0.570
APG92392.1
Membrane protein; Region:COG5400S.
  
     0.566
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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