Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APG91649.1Hypothetical protein. (367 aa)    
Predicted Functional Partners:
APG91332.1
Kinesin-like protein; Region:COG1196D.
  
 
 0.737
ndvB
Protein NdvB; Region:COG3459G.
  
 
 0.696
APG90351.1
Hypothetical protein; Region:COG5350R.
  
     0.660
APG90391.1
Peptidoglycan-binding protein; Region:COG3409M.
  
     0.626
APG91356.1
Hypothetical protein.
  
     0.607
APG90429.1
Membrane spanning protein; Region:COG1807M.
 
   
 0.601
APG90389.1
Hypothetical protein.
  
     0.596
APG91130.1
Primosomal protein I.
  
     0.590
cya-14
Adenylate cyclase; Region:COG0457R.
 
 
 0.560
APG91568.1
Hypothetical protein; Region:COG0593L.
  
     0.546
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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