Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
APG91656.1TPR domain-containing protein. (307 aa)    
Predicted Functional Partners:
APG91655.1
Hypothetical protein; Region:COG3482S.
 
  
 0.966
cya-17
Adenylate cyclase; Region:COG1672R.
 
   
 0.839
cya-18
Adenylate cyclase; Region:COG0457R.
 
     0.721
APG89355.1
Nitroreductase family protein.
  
  
 0.663
APG90857.1
Nitroreductase protein; Region:COG0778C.
  
  
 0.663
bluB
Nitroreductase, BluB-like protein; Region:COG0778C.
  
  
 0.656
APG91109.1
Hypothetical protein.
  
     0.638
APG91130.1
Primosomal protein I.
  
     0.609
APG89436.1
ABC transporter; Region:COG0842V.
  
  
 0.572
APG91404.1
Inner membrane transport permease YadH; Region:COG0842V.
  
  
 0.572
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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