Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
livMHigh-affinity branched-chain amino acid transport system permease LivM; Region:COG4177E; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
APG91699.1
Branched-chain amino acid ABC transporter permease; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
livG
Branched-chain amino acid ABC transporter ATP-binding protein; Region:COG0411E.
 
 0.998
braG
High-affinity branched-chain amino acid transporter ATP-binding protein BraG; Region:COG0410E.
 
 0.997
APG91698.1
Branched chain amino acid ABC transporter substrate-binding protein; Region:COG0683E.
 
 
 0.996
livG-2
High-affinity branched-chain amino acid transport ATP-binding protein LivG; Region:COG0411E.
 
 0.993
livF
High-affinity branched-chain amino acid transport ATP-binding protein LivF; Region:COG0410E.
 
 0.990
livH
High-affinity branched-chain amino acid transport system permease LivH; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
APG90542.1
ABC-transporter permease protein; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.984
APG92650.1
ABC transporter ATP-binding protein; Region:COG0411E.
 
 0.979
APG92652.1
ABC transporter permease; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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