STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91750.1N-methyl-l-tryptophan oxidase; Region:COG0665E. (395 aa)    
Predicted Functional Partners:
soxA
Sarcosine oxidase subunit alpha; Region:COG0404E.
  
 
 0.934
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
 
  
 0.536
APG91773.1
Hypothetical protein; Region:COG2017G.
  
     0.513
soxD
Sarcosine oxidase subunit delta; Region:COG4311E.
  
 
 0.505
fliM
Flagellar motor switch protein FliM; Region:COG1868N.
  
    0.492
APG92394.1
Hypothetical protein.
  
     0.475
APG90958.1
Soluble lytic murein transglycosylase.
  
     0.467
APG91751.1
Transglycosylase protein; Region:COG0741M.
       0.458
APG91139.1
Bacteriophage protein.
  
     0.456
APG91143.1
Hypothetical protein; Region:COG3566S.
  
     0.456
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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