STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91751.1Transglycosylase protein; Region:COG0741M. (177 aa)    
Predicted Functional Partners:
APG91237.1
Lytic transglycosylase, catalytic; Region:COG0741M.
  
     0.555
flgE
Flagellar hook protein FlgE; Region:COG1749N.
 
  
 0.489
cheA-2
Chemotaxis protein CheA; Region:COG0643NT.
 
    0.486
fliI
Flagellum-specific ATP synthase FliI; Region:COG1157NU.
  
  
 0.483
fliE
Flagellar hook-basal body complex protein FliE; Region:COG1677N.
  
  
 0.480
amiD
N-acetylmuramoyl-L-alanine amidase AmiD; Region:COG3023M.
     
 0.480
APG91753.1
DnaJ family molecular chaperone; Region:COG1076O.
       0.471
APG91750.1
N-methyl-l-tryptophan oxidase; Region:COG0665E.
       0.458
fliM
Flagellar motor switch protein FliM; Region:COG1868N.
  
    0.411
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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