STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91757.1Lytic murein transglycosylase; Region:COG0741M. (339 aa)    
Predicted Functional Partners:
fliM
Flagellar motor switch protein FliM; Region:COG1868N.
 
    0.572
APG91756.1
Transmembrane efflux protein; Region:COG1280E.
   
   0.554
APG90342.1
Hypothetical protein; Region:COG1376M.
  
     0.499
fliI
Flagellum-specific ATP synthase FliI; Region:COG1157NU.
  
  
 0.483
APG91748.1
Cell division protein FtsL; Region:COG5462S.
  
     0.483
APG89405.1
L,D-transpeptidase; Region:COG1376M.
  
     0.480
fliE
Flagellar hook-basal body complex protein FliE; Region:COG1677N.
  
  
 0.480
motD
Chemotaxis protein MotD; Region:COG3144N.
 
    0.475
APG91332.1
Kinesin-like protein; Region:COG1196D.
  
    0.470
flgL
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.457
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.