Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG91783.1RpiR family transcriptional regulator; Region:COG1737K. (294 aa)    
Predicted Functional Partners:
APG91782.1
N-formylglutamate amidohydrolase; Region:COG3931E.
 
  
 0.925
glnA-2
Glutamine synthetase; Region:COG0174E; Belongs to the glutamine synthetase family.
 
    0.803
mdh
NAD-dependent methanol dehydrogenase Mdh; Region:COG1454C.
 
   
 0.765
ssdA
Succinate-semialdehyde dehydrogenase; Region:COG1012C; Belongs to the aldehyde dehydrogenase family.
 
    0.723
iolC
5-dehydro-2-deoxygluconokinase IolC; Region:COG0524G.
     
 0.511
bioN
Biotin transporter, permease protein BioN; Region:COG0619H.
  
    0.460
APG91784.1
Periplasmic binding ABC transporter; Region:COG1840P.
       0.458
APG91781.1
Amino acid/metabolite permease; Region:COG0531E.
  
    0.452
APG92477.1
N-formylglutamate amidohydrolase protein; Region:COG3931E.
 
  
 0.428
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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