rpoD protein (Sinorhizobium americanum) - STRING interaction network

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rpoD

RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (684 aa)

Predicted Functional Partners:

rpoA

0.976

rpoB

0.975

rpoC

0.958

rpoZ

0.948

nusA

0.923

dnaG

0.896

gst

0.868

APG89836.1

0.841

APG92889.1

0.820

APG89806.1

0.815

Your Current Organism:

Sinorhizobium americanum

NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APG89806.1	rpoA	SAMCFNEI73_Ch0475	SAMCFNEI73_Ch1502	Crp family transcriptional regulator; Region:COG0664T.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.809
APG89806.1	rpoB	SAMCFNEI73_Ch0475	SAMCFNEI73_Ch1470	Crp family transcriptional regulator; Region:COG0664T.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.774
APG89806.1	rpoC	SAMCFNEI73_Ch0475	SAMCFNEI73_Ch1471	Crp family transcriptional regulator; Region:COG0664T.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.775
APG89806.1	rpoD	SAMCFNEI73_Ch0475	SAMCFNEI73_Ch2608	Crp family transcriptional regulator; Region:COG0664T.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.815
APG89806.1	rpoZ	SAMCFNEI73_Ch0475	SAMCFNEI73_Ch1134	Crp family transcriptional regulator; Region:COG0664T.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.759
APG89836.1	rpoA	SAMCFNEI73_Ch0506	SAMCFNEI73_Ch1502	GcrA cell cycle regulator; Region:COG5352S.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.667
APG89836.1	rpoB	SAMCFNEI73_Ch0506	SAMCFNEI73_Ch1470	GcrA cell cycle regulator; Region:COG5352S.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.803
APG89836.1	rpoC	SAMCFNEI73_Ch0506	SAMCFNEI73_Ch1471	GcrA cell cycle regulator; Region:COG5352S.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.803
APG89836.1	rpoD	SAMCFNEI73_Ch0506	SAMCFNEI73_Ch2608	GcrA cell cycle regulator; Region:COG5352S.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.841
APG89836.1	rpoZ	SAMCFNEI73_Ch0506	SAMCFNEI73_Ch1134	GcrA cell cycle regulator; Region:COG5352S.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.715
APG92889.1	rpoA	SAMCFNEI73_Ch3639	SAMCFNEI73_Ch1502	Transcriptional regulator, CarD family; Region:COG1329K.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.888
APG92889.1	rpoB	SAMCFNEI73_Ch3639	SAMCFNEI73_Ch1470	Transcriptional regulator, CarD family; Region:COG1329K.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.876
APG92889.1	rpoC	SAMCFNEI73_Ch3639	SAMCFNEI73_Ch1471	Transcriptional regulator, CarD family; Region:COG1329K.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.874
APG92889.1	rpoD	SAMCFNEI73_Ch3639	SAMCFNEI73_Ch2608	Transcriptional regulator, CarD family; Region:COG1329K.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.820
APG92889.1	rpoZ	SAMCFNEI73_Ch3639	SAMCFNEI73_Ch1134	Transcriptional regulator, CarD family; Region:COG1329K.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.889
dnaG	nusA	SAMCFNEI73_Ch2613	SAMCFNEI73_Ch0220	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Transcription elongation protein NusA; Participates in both transcription termination and antitermination.	0.619
dnaG	rpoA	SAMCFNEI73_Ch2613	SAMCFNEI73_Ch1502	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.600
dnaG	rpoB	SAMCFNEI73_Ch2613	SAMCFNEI73_Ch1470	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.693
dnaG	rpoC	SAMCFNEI73_Ch2613	SAMCFNEI73_Ch1471	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.583
dnaG	rpoD	SAMCFNEI73_Ch2613	SAMCFNEI73_Ch2608	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.896

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