Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
APG91971.1Hypothetical protein. (382 aa)    
Predicted Functional Partners:
APG91970.1
Hypothetical protein; Region:COG0464MDT.
 
     0.958
APG91972.1
Hypothetical protein.
 
     0.919
APG91966.1
Hypothetical protein.
 
     0.837
APG91950.1
Hypothetical protein; Region:COG5010UW.
  
     0.728
APG90126.1
Hypothetical protein; Region:COG5403S.
  
     0.727
APG90467.1
Hypothetical protein; Region:COG3832S.
  
     0.638
APG90871.1
Lactoylglutathione lyase; Region:COG0346Q.
  
     0.625
APG91505.1
Zinc-finger protein.
  
     0.596
APG90997.1
Hypothetical protein; Region:COG3108S.
  
     0.567
APG89403.1
Hydantoinase/oxoprolinase family protein; Region:COG0145EQ.
  
     0.546
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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