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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG91977.1Pyridoxamine oxidase protein; Region:COG0748P. (247 aa)    
Predicted Functional Partners:
APG91818.1
Iron ABC transport system, solute-binding protein; Region:COG0614P.
  
    0.795
futA
Iron uptake protein A1; Region:COG1840P.
   
    0.769
opuA-3
Glycine betaine transport system permease protein OpuAB; Region:COG4176E.
       0.560
proV-2
Glycine betaine/L-proline ABC transporter ATP-binding protein; Region:COG4175E.
       0.560
nolR
Nodulation protein NolR.
       0.535
gltB-2
Ferredoxin-dependent glutamate synthase 1; Region:COG0067E.
     
 0.518
hxuC
Heme/hemopexin utilization protein C; Region:COG4771P.
  
  
 0.512
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC; Region:COG1120PH.
  
  
 0.509
pdxJ
Pyridoxine 5'-phosphate synthase PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
     
  0.499
pdxY
Pyridoxamine kinase PdxY; Region:COG2240H; Belongs to the pyridoxine kinase family.
     
  0.499
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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