Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kdgK2-dehydro-3-deoxygluconokinase; Region:COG0524G. (315 aa)    
Predicted Functional Partners:
eda
2-dehydro-3-deoxy-phosphogluconate aldolase Eda; Region:COG0800G.
 
 
 0.960
edd
Phosphogluconate dehydratase Edd; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
    
 0.911
cbbE
Ribulose-phosphate 3-epimerase CbbE; Region:COG0036G; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.844
araB
Ribulokinase 2; Region:COG1069G.
  
 
 0.810
dgoA
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Region:COG0800G.
 
  
 0.758
frk
Fructokinase Frk; Region:COG0524G.
  
     0.615
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Region:COG0106E.
  
    0.614
aglA-2
Alpha-glucosidase AglA; Region:COG0366G.
     
 0.567
garD
D-galactarate dehydratase GarD; Region:COG2721G.
 
   
 0.506
mgsA
Methylglyoxal synthase MgsA; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
     0.459
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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