STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (497 aa)    
Predicted Functional Partners:
glpD
Aerobic glycerol-3-phosphate dehydrogenase GlpD; Region:COG0578C; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 0.998
plsY
Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
    
 0.918
adhC
NADP-dependent alcohol dehydrogenase C 2; Region:COG1064G.
    
 0.909
APG91970.1
Hypothetical protein; Region:COG0464MDT.
   
  0.764
degP
Periplasmic serine endoprotease DegP-like protein; Region:COG0265O; Belongs to the peptidase S1C family.
   
 0.757
degP-2
Periplasmic serine endoprotease DegP; Region:COG0265O; Belongs to the peptidase S1C family.
   
 0.757
htrA
Periplasmic serine endoprotease DegP-like protein; Region:COG0265O; Belongs to the peptidase S1C family.
   
 0.757
alaS
alanine--tRNA ligase AlaS; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  0.707
APG91468.1
Cobalamin synthesis protein.
 
  
 0.707
gltA
Citrate synthase GltA; Region:COG0372C; Belongs to the citrate synthase family.
  
  
 0.704
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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